Jones Lab
Jones Lab

Contact Information

Department of EntomologyS-205D Agricultural Science Center North Department of Entomology Lexington, KY 40546-0091

(859) 218-6831

beryl.jones@uky.edu

CV

CV

EDUCATION & PROFESSIONAL EXPERIENCE

Assistant Professor
Department of Entomology
University of Kentucky
Lexington, KY USA
Present
Postdoctoral Research Associate Department of Ecology and Evolutionary Biology
Lewis-Sigler Institute for Integrative Genomics
Princeton University
Princeton, NJ USA
Advisor: Dr. Sarah D. Kocher
2019 - 2023
Ph.D. Ecology, Evolution, and Conservation Biology University of Illinois at Urbana-Champaign
Urbana, IL USA
Advisor: Dr. Gene E. Robinson
2012 - 2019
IGERT Fellow Smithsonian Tropical Research Institute
Barro Colorado Island, Panama
Advisor: Dr. William T. Wcislo
2013 - 2015
Biological Science Technician USDA-ARS Carl Hayden Bee Research Center
Tucson, AZ USA
2011 – 2012
​Bachelor of Science, Summa cum Laude and Honors College of Science
University of Arizona
Tucson, AZ USA
Majors: Ecology and Evolutionary Biology, Biochemistry
and Molecular Biophysics, Molecular and Cellular Biology
Minors: Math, Chemistry
Thesis Advisors: Dr. Daniel R. Papaj & Dr. Wulfila Gronenberg
2006 - 2011

PUBLICATIONS

Jones, B.M., Rubin, B.E.R., Dudchenko, O., Kingwell, C.J., et al. (2023). Convergent and complementary selection shaped gains and losses of eusociality in sweat bees. Nature Ecology & Evolution, 1-13.

Gernat, T., Jagla, T., Jones, B.M., Middendorf, M., and Robinson, G.E. (2023). Automated monitoring of honey bees with barcodes and artificial intelligence reveals two distinct social networks from a single affiliative behavior. Scientific Reports, 13(1):1541.

Jones, B.M., Rao, V.D., Gernat, T., Jagla, T., Cash-Ahmed, A., Rubin, B.E.R., Comi, T.J., Bhogale, S., Husain, S.S., Blatti III, C., Middendorf, M., Sinha, S., Chandrasekaran, S., and Robinson, G.E. (2020). Individual differences in honey bee behavior enabled by plasticity in brain gene regulatory networks. eLife, 9:e62850.

Sinha, S., Jones, B.M., Traniello, I.M., Bukhari, S.A., Halfon, M.S., Hofmann, H.A., Huang, S., Katz, P.S., Keagy, J., Lynch, V., Sokolowski, M.B., Stubbs, L., Tabe-Bordbar, S., Wolfner, M.F., and Robinson, G.E. (2020). Behavior-related gene regulatory networks: A new level of organization in the brain. PNAS, 117(38):23270-23279.

Kapheim, K.M., Jones, B.M., Pan, H., Li, C., Harpur, B.A., Kent, C.F., Zayed, A., Ioannidis, P., Waterhouse, R.M., Kingwell, C., Stolle, E., Avalos, A., Zhang, G., McMillan, W.O., and Wcislo, W.T. (2020). Developmental plasticity shapes social traits and selection in a facultatively eusocial bee. PNAS, 117(24):13615-13625.

Jones, B.M., Seymoure, B.M., Comi, T.J. and Loew, E.R. (2020). Species and sex differences in eye morphometry and visual responsivity of two crepuscular sweat bee species (Megalopta spp., Hymenoptera: Halictidae). Biological Journal of the Linnean Society, 130(3):533-544.

Geffre, A.C., Gernat, T., Harwood, G.P., Jones, B.M., Gysi, D.M., Hamilton, A.R., Bonning, B.C., Toth, A.L., Robinson, G.E., and Dolezal, A.G. (2020). Honey bee virus causes context-dependent changes in host social behavior. PNAS, 117(19):10406-10413.

Kapheim, K.M., Jones, B.M., Søvik., E, Stolle, E., Waterhouse, R.M., Bloch, G., and Ben-Shahar, Y. (2020). Brain microRNAs among social and solitary bees. Royal Society Open Science, 7(7):200517.

Gernat, T., Jagla, T., Jones, B.M., Middendorf, M., and Robinson, G.E. (2020). Automated monitoring of animal behaviour with barcodes and convolutional neural networks. bioRxiv, doi: 10.1101/2020.11.27.401760.

Rubin, B.E.R., Jones, B.M., Hunt, B.G., and Kocher, S.D. (2019). Rate variation in the evolution of non-coding DNA associated with social evolution in bees. Philosophical Transactions of the Royal Society B, 374:20180247.

Kapheim, K.M., Pan, H., Li, C., Blatti, C., Harpur, B.A., Ioannidis, P., Jones, B.M., Kent, C.F., Ruzzante, L., Sloofman, L., Stolle, E., Waterhouse, R.M., Zayed, A., Zhang, G., and Wcislo, W.T. (2019). Draft genome assembly and population genetics of an agricultural pollinator, the solitary alkali bee (Halictidae: Nomia melanderi). G3, 9:625-634.

Jones, B.M. and Robinson, G.E. (2018). Genetic accommodation and the role of ancestral plasticity in the evolution of insect eusociality. Journal of Experimental Biology, 221:jeb153163.

Jones, B.M., Kingwell, C.J., Wcislo, W.T., and Robinson, G.E. (2017). Caste-biased gene expression in a facultatively eusocial bee suggests a role for genetic accommodation in the evolution of eusociality. Proceedings of the Royal Society B., 284:20162228.

Corby-Harris, V., Meador, C.A.D., Snyder, L.A., Schwan, M.R., Maes, P., Jones, B.M., Walton, A., and Anderson, K.E. (2016). Transcriptional, translational, and physiological signatures of undernourished honey bees (Apis mellifera) suggest a role for hormonal factors in hypopharyngeal gland degradation. Journal of Insect Physiology, 85:65-75.

Jones, B.M., Wcislo, W.T. and Robinson, G.E. (2015). Developmental transcriptome for a facultatively eusocial bee, Megalopta genalis. G3, 5:2127-2135.

Corby-Harris, V., Jones, B.M., Walton, A., Schwan, M., and Anderson, K.E. (2014). Transcriptional markers of sub-optimal nutrition in developing Apis mellifera nurse workers. BMC Genomics, 15:134.

Jones, B.M., Leonard, A.S., Papaj, D.R. and Gronenberg, W. (2013). Plasticity of the worker bumblebee brain in relation to age and rearing environment. Brain, Behavior and Evolution, 82:250-261.

Anderson, K., Sheehan, T.H., Mott, B.M., Maes, P., Snyder, L., Schwan, M., Walton, A., Jones, B.M., and Corby-Harris, V. (2013). Microbial ecology of the hive and pollination landscape: bacterial associates from floral nectar, the alimentary tract and stored food of honey bees (Apis meliifera). PLoS One, 8: e83125.

GRANTS AND AWARDS

George C. Eickwort Student Research Award (IUSSI-NAS) 2019
Robert Emerson Memorial Award (UIUC) 2018
Harley J. Van Cleave Research Award (UIUC) 2016
Francis M. and Harlie M. Clark Research Support Grant (UIUC) 2016
Animal Behavior Society Student Research Grant 2016
NSF IGERT Research Grants (UIUC) 2013, 2014
mithsonian Tropical Research Institute Travel Grant 2014
PEEC Travel Grant (UIUC) 2014, 2015, 2016, 2017, 2018
Graduate College Travel Award (UIUC) 2014, 2016, 2017
Ernst Mayr Fellowship, Smithsonian Tropical Research Institute 2013 - 2014
NSF Graduate Research Fellowship 2012 - 2015
NSF IGERT (VInTG) Fellowship 2012 - 2014
Illinois Distinguished Fellowship 2012 - 2018
Biochemistry and Molecular Biophysics Outstanding Senior Thesis Award (UA) 2011
Ecology and Evolutionary Biology Outstanding Senior Award (UA) 2011
Ecology and Evolutionary Biology Excellence in Undergraduate Research Award (UA) 2011
Edmund A. Arbas Award of Excellence, Department of Neuroscience (UA) 2011
Pillars of Excellence, Honors College student scholar award (UA) 2011
Barry M. Goldwater Fellowship (2 years of support) 2010 - 2011
Galileo Circle Scholar, UA College of Science award 2009
Janelia Undergraduate Scholar, HHMI 2008
Flinn Scholarship, tuition and travel award 2006 - 2010
Phi Beta Kappa member 2008 - present
Elks Most Valuable Student Award 2006 - 2010
Beckman Finalist, scholarship supporting chemistry and life science research 2007
SMART Grant 2008 - 2009
Kiwanis District Scholarship 2006
University Grants, financial awards 2006 - 2010
President’s Award for Excellence, UA merit-based scholarship 2006 - 2010

ADDITIONAL WORK AND RESEARCH EXPERIENCE

Undergraduate research associate Department of Ecology and Evolutionary Biology
University of Arizona
Tucson, AZ USA
Advisors: Dr. Daniel R. Papaj & Dr. Wulfila Gronenberg
2008 - 2011
Undergraduate field assistant University Federal de Sergipe
Aracaju, Brazil
Advisors: Dr. Hans C. Kelstrup & Dr. Lynn M. Riddiford
2010
Pupae Manager Tucson Botanical Gardens
Tucson, AZ USA
2009 – 2010
Research Associate Janelia Farm Research Campus (HHMI)
Ashburn, VA USA
Advisor: Dr. Lynn M. Riddiford
2009
Janelia Undergraduate Scholar Janelia Farm Research Campus (HHMI)
Ashburn, VA USA
Advisor: Dr. Lynn M. Riddiford
2008
Undergraduate research associate Department of Biochemistry and Molecular Biophysics
University of Arizona
Tucson, AZ USA
Advisor: Dr. Roger L. Miesfeld
2006 - 2008
Research Associate I Translational Genomics Research Institute (TGen)
Phoenix, AZ USA
Advisor: Dr. David Duggan
2006
Research Intern
Translational Genomics Research Institute (TGen)
Phoenix, AZ USA
Advisor: Dr. David Duggan
2005

PROFESSIONAL PRESENTATIONS

Invited Conference Talks
Entomological Society of America. Denver, CO USA (upcoming) 2021
Animal Behavior Society. Virtual conference 2021
Entomological Society of America. Denver, CO USA 2017
International Congress of Entomology. Orlando, FL USA 2016
Invited Seminars
Political Science Graduate Brown Bag. Urbana, IL USA 2017
Heart of Illinois Beekeepers Association. Peoria, IL USA 2015
IGERT symposium. Urbana, IL USA 2014
Tucson Botanical Gardens Public Talk Series. Tucson, AZ USA 2010
51st Annual Drosophila Conference. Washington, DC USA 2010
Contributed Talks and Seminars
Animal Behavior Society. Virtual conference 2020
Biology & Genomics of Social Insects. Cold Spring Harbor, NY USA 2018
Arthropod Genomics Symposium. Urbana, IL USA 2018
Midwest Ecology and Evolution Conference. Urbana, IL USA 2017
Biology & Genomics of Social Insects. Cold Spring Harbor, NY USA 2015
Midwest Ecology and Evolution Conference. Bloomington, IN USA 2015
International Union for the Study of Social Insects. Cairns, Australia 2014
UIUC EcoLunch. Urbana, IL USA 2013
STRI Behavioral Ecology Group, Panama City, Panama 2013
Capybara Chalk Talk Series. Barro CoIorado Island, Panama 2013
Biological, Engineering, and Chemical Undergraduate Research. Tucson, AZ USA 2010
Undergraduate Teaching Assistant Seminar. Tucson, AZ USA 2010
Poster Presentations
Biology & Genomics of Social Insects. Virtual conference 2021
Carl R. Woese IGB Fellows Symposium. Urbana, IL USA
-Awarded Best Poster Award
2015
Animal Behavior Society. Bloomington, IN USA
-Awarded Honorable Mention Genesis Award
2011
Ecology and Evolutionary Biology Poster Session. Tucson, AZ USA
-Awarded First Place in Poster Contest
2011
Biological, Engineering, and Chemical UG Research Conference. Tucson, AZ USA
-Awarded Poster Commendation
2011
Ecology and Evolutionary Biology Poster Session. Tucson, AZ USA
-Awarded First Place in Poster Contest
2010
Genetics Society of America 50th Annual Drosophila Conference. Chicago, IL USA 2009

TEACHING EXPERIENCE

Lecturer University of Illinois Bees and Beekeeping Short Course
University of Illinois at Urbana-Champaign, Urbana, IL USA
2018
Teaching Assistant Perl and Unix for Bioinformatics
University of Illinois at Urbana-Champaign, Urbana, IL USA
2017
Teaching Assistant Genetic Engineering Lab
University of Illinois at Urbana-Champaign, Urbana, IL USA
2015
Guest Lecturer Behavioral Ecology
University of Illinois at Urbana-Champaign, Urbana, IL USA
2015
Teaching Assistant Introduction to Statistical Methods 2010
Preceptor Biochemistry
University of Arizona, Tucson, AZ USA
2009
Preceptor Insect Discovery
University of Arizona, Tucson, AZ USA
2009
Preceptor Environment and Society
University of Arizona, Tucson, AZ USA
2009

PROFESSIONAL ACTIVITIES

Conference Organizer

Midwest Ecology and Evolution Conference (student-led and focused conference with over 200 attendees).
Urbana, IL USA. 2017.

Symposium Organizer

GEEB Graduate Student Symposium. Urbana, IL USA. 2018.
Entomological Society of America, Entomology Conference. Denver, CO USA. 2017.

Peer Reviewer

Molecular Ecology • Proceedings of the Royal Society of London B • Ecology and Evolution • Philosophical Transactions of
the Royal Society B • Brain, Behavior and Evolution • Journal of Experimental Biology • The Science of Nature • Journal of
Insect Science • Cell & Tissue Research

Society Member

Entomological Society of America • International Union for the Study of Social Insects • Animal Behavior Society • Society for Molecular Biology and Evolution

Workshops

Improving Analysis Workflows with Snakemake. Princeton, NJ USA. 2020.
Research Computing Bootcamp. Princeton, NJ USA. 2019.
NSF Social Evolution and Genome Complexity. Urbana, IL USA. 2017.
Effective Mentoring. Urbana, IL USA. 2017.
RNA-seq with Galaxy and R. Urbana, IL USA. 2017.
Annual Ecdysone Workshop, 51st Annual Drosophila Conference, Washington, DC USA. 2010.

COMMUNITY AND ACADEMIC SERVICE

​Pollen Power Girls’ Day Camp, Invited Speaker and Volunteer. Urbana, IL USA. 2017, 2018.
University of Illinois Bees and Beekeeping Short Course. Urbana, IL USA. 2016, 2018.
World of Genomics 3-day event at The Field Museum, Chicago, IL USA; over 15k attendees. 2017.
Brain Awareness Day volunteer. Urbana, IL USA. 2017.
GEEB VP/Treasurer. Urbana, IL USA. 2017-2018.
Judge for Undergraduate Research Symposium. Urbana, IL USA. 2017.
Member of PEEC Graduate Admissions Committee. Urbana, IL USA. 2017.
GEEB webmaster. Urbana, IL USA. 2016-2017.
Student representative on PEEC Steering Committee. Urbana, IL USA. 2015-2016.
Judge for GEEB symposium poster session. Urbana, IL USA. 2016.
Judge for GEEB symposium student talks. Urbana, IL USA. 2015.
Student chair for PEEC student-invited speaker. Urbana, IL USA. 2014-2015
Genome Day volunteer. Urbana, IL USA. 2014, 2015.
Danville Science Night volunteer. Danville, IL USA. 2013.
Pollinatarium volunteer. Urbana, IL USA. 2013-2017.
Capybara Seminar Organizer. Barro Colorado Island, Panama. 2013.
Biochemistry Mentor. Tucson, AZ USA. 2008-2011.
Biochemistry Ambassador. Tucson, AZ USA. 2007-2011.
Honors Shadowcats Recruitment. Tucson, AZ USA. 2006-2008.
Chemistry Club. Tucson, AZ USA. 2006-2007.

Contact Information

Department of EntomologyS-205D Agricultural Science Center North Department of Entomology Lexington, KY 40546-0091

(859) 218-6831

beryl.jones@uky.edu